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1.
Mymensingh Med J ; 32(2): 584-586, 2023 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-37002774

RESUMO

Porphyria cutanea tarda is a rare disorder of heme metabolism due to deficiency of the enzyme uroporphyrinogen decarboxylase which is manifested as some typical dermatological features and hepatic dysfunction. The Hepatitis-C virus co-infection is common and it can be aggravated by other environmental factors. We report a case of porphyria cutanea tarda in a 37-year-old woman, who presented with recurrent skin blisters and has concomitant Hepatitis-C virus infection. She was taking oestrogen containing oral contraceptive pill for a long duration. The diagnosis of porphyria cutanea tarda was considered on the basis of clinical features and high level of urine porphyrin level. She was put on hydroxychloroquine and combination drugs for Hepatitis-C virus with significant improvement after 3 months of therapy.


Assuntos
Coinfecção , Hepatite C , Porfiria Cutânea Tardia , Dermatopatias , Feminino , Humanos , Adulto , Porfiria Cutânea Tardia/complicações , Porfiria Cutânea Tardia/diagnóstico , Porfiria Cutânea Tardia/terapia , Coinfecção/diagnóstico , Coinfecção/complicações , Uroporfirinogênio Descarboxilase/metabolismo , Hepacivirus/metabolismo
2.
F1000Res ; 11: 945, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-37360939

RESUMO

Background: Porphyria cutanea tarda (PCT) is a complex metabolic disease resulting from altered activity of the enzyme uroporphyrinogen decarboxylase (UROD) in the liver resulting in accumulation of uroporphyrin. PCT presents as a blistering photodermatitis with skin fragility, vesicles, scarring and milia. Case: We report a case of PCT in a 67-year-old man with hemochromatosis (HFE) gene mutation who, following a major syncopal episode in response to venesection was commenced on low dose hydroxychloroquine. Conclusions: Low dose hydroxychloroquine provided a safe and effective alternative to venesection in this patient who was needle phobic.


Assuntos
Hemocromatose , Porfiria Cutânea Tardia , Masculino , Humanos , Idoso , Porfiria Cutânea Tardia/tratamento farmacológico , Porfiria Cutânea Tardia/genética , Hidroxicloroquina/uso terapêutico , Uroporfirinogênio Descarboxilase/genética , Uroporfirinogênio Descarboxilase/metabolismo , Hemocromatose/genética
3.
Arch. pediatr. Urug ; 92(2): e307, dic. 2021. ilus, tab
Artigo em Espanhol | LILACS, UY-BNMED, BNUY | ID: biblio-1339135

RESUMO

Las porfirias son un grupo complejo y heterogéneo de defectos en la vía de la síntesis del hemo. La porfiria hepato eritropoyética es un subtipo muy poco frecuente y de presentación en la infancia, con compromiso cutáneo predominante. Describimos el caso clínico de una paciente de 5 años, que se presenta con lesiones cutáneas e hipertricosis, se confirma el diagnóstico por elevación de uroporfirinas en orina y secuenciación del gen UROD.


Porphyria is a complex and heterogeneous group of heme synthesis disorder. Hepato-erythropoietic porphyria is a very rare subtype that onsets in childhood, and shows predominant skin involvement. We describe the clinical case of a 5-year-old patient who showed skin lesions and hypertrichosis and whose diagnosis was confirmed due to increased uroporphyrins in urine and UROD gene sequencing


A porfiria é um grupo complexo e heterogêneo de distúrbios da síntese do grupo heme. A porfiria hepato-eritropoiética é um subtipo muito raro que se inicia na infância e mostra envolvimento predominante da pele. Descrevemos o caso clínico de uma paciente de 5 anos que apresentou lesões cutâneas e hipertricose e cujo diagnóstico foi confirmado por aumento de uroporfirinas na urina e sequenciamento do gene UROD.


Assuntos
Humanos , Feminino , Pré-Escolar , Vesícula/etiologia , Porfiria Hepatoeritropoética/complicações , Porfiria Hepatoeritropoética/genética , Porfiria Hepatoeritropoética/urina , Diabetes Mellitus Tipo 1/complicações , Hipertricose/etiologia , Uroporfirinogênio Descarboxilase/análise , Uroporfirinas/urina , Vesícula/tratamento farmacológico , Coproporfirinas/urina , Hipertricose/tratamento farmacológico
4.
BMJ Case Rep ; 14(10)2021 Oct 19.
Artigo em Inglês | MEDLINE | ID: mdl-34667041

RESUMO

Porphyria cutanea tarda is the most common type of porphyria. It is associated with a deficiency of uroporphyrinogen decarboxylase enzyme responsible for heme synthesis. Clinical manifestations are predominantly dermatological and very rarely present with ocular involvement. Although scleral thinning in the interpalpebral area is a well-documented entity, sight-threatening corneal involvement is rarely described. We, herein report a case of a 58-year-old man who presented with ocular surface dryness, photophobia and mild redness. Slit-lamp biomicroscopy revealed corneo-scleral thinning in both eyes. The diagnosis was confirmed with a urine porphyrin test, serum iron and serum ferritin levels. We started him on conservative management after which he was lost to follow-up. He presented again after 6 years with total corneal opacification and progressive loss of vision in the right eye.


Assuntos
Oftalmopatias , Porfiria Cutânea Tardia , Humanos , Masculino , Pessoa de Meia-Idade , Fotofobia , Porfiria Cutânea Tardia/complicações , Porfiria Cutânea Tardia/diagnóstico , Esclera , Uroporfirinogênio Descarboxilase
5.
Protein Sci ; 29(3): 789-802, 2020 03.
Artigo em Inglês | MEDLINE | ID: mdl-31930600

RESUMO

Acinetobacter baumannii is well known for causing hospital-associated infections due in part to its intrinsic antibiotic resistance as well as its ability to remain viable on surfaces and resist cleaning agents. In a previous publication, A. baumannii strain AB5075 was studied by transposon mutagenesis and 438 essential gene candidates for growth on rich-medium were identified. The Seattle Structural Genomics Center for Infectious Disease entered 342 of these candidate essential genes into our pipeline for structure determination, in which 306 were successfully cloned into expression vectors, 192 were detectably expressed, 165 screened as soluble, 121 were purified, 52 crystalized, 30 provided diffraction data, and 29 structures were deposited in the Protein Data Bank. Here, we report these structures, compare them with human orthologs where applicable, and discuss their potential as drug targets for antibiotic development against A. baumannii.


Assuntos
Acinetobacter baumannii/química , Acinetobacter baumannii/efeitos dos fármacos , Antibacterianos/farmacologia , Proteínas de Bactérias/antagonistas & inibidores , Genoma Bacteriano/efeitos dos fármacos , Genoma Bacteriano/genética , Acinetobacter baumannii/genética , Proteínas de Bactérias/genética , Coproporfirinogênio Oxidase/química , Coproporfirinogênio Oxidase/metabolismo , Farmacorresistência Bacteriana/efeitos dos fármacos , Humanos , Metionina tRNA Ligase/química , Metionina tRNA Ligase/metabolismo , Modelos Moleculares , Conformação Proteica , Uroporfirinogênio Descarboxilase/química , Uroporfirinogênio Descarboxilase/metabolismo
6.
J Biol Chem ; 295(6): 1539-1550, 2020 02 07.
Artigo em Inglês | MEDLINE | ID: mdl-31914409

RESUMO

Apicomplexan parasites such as Toxoplasma gondii possess an unusual heme biosynthesis pathway whose enzymes localize to the mitochondrion, cytosol, or apicoplast, a nonphotosynthetic plastid present in most apicomplexans. To characterize the involvement of the apicoplast in the T. gondii heme biosynthesis pathway, we investigated the role of the apicoplast-localized enzyme uroporphyrinogen III decarboxylase (TgUroD). We found that TgUroD knockdown impaired parasite proliferation, decreased free heme levels in the parasite, and decreased the abundance of heme-containing c-type cytochrome proteins in the parasite mitochondrion. We validated the effects of heme loss on mitochondrial cytochromes by knocking down cytochrome c/c1 heme lyase 1 (TgCCHL1), a mitochondrial enzyme that catalyzes the covalent attachment of heme to c-type cytochromes. TgCCHL1 depletion reduced parasite proliferation and decreased the abundance of c-type cytochromes. We further sought to characterize the overall importance of TgUroD and TgCCHL1 for both mitochondrial and general parasite metabolism. TgUroD depletion decreased cellular ATP levels, mitochondrial oxygen consumption, and extracellular acidification rates. By contrast, depletion of TgCCHL1 neither diminished ATP levels in the parasite nor impaired extracellular acidification rate, but resulted in specific defects in mitochondrial oxygen consumption. Together, our results indicate that the apicoplast has a key role in heme biology in T. gondii and is important for both mitochondrial and general parasite metabolism. Our study highlights the importance of heme and its synthesis in these parasites.


Assuntos
Apicoplastos/metabolismo , Heme/metabolismo , Proteínas de Protozoários/metabolismo , Toxoplasma/metabolismo , Uroporfirinogênio Descarboxilase/metabolismo , Vias Biossintéticas , Heme/análise , Humanos , Mitocôndrias/metabolismo , Proteínas de Protozoários/análise , Toxoplasma/enzimologia , Toxoplasmose/parasitologia , Uroporfirinogênio Descarboxilase/análise
7.
Mol Genet Metab ; 128(3): 164-177, 2019 11.
Artigo em Inglês | MEDLINE | ID: mdl-31326287

RESUMO

Porphyrias, is a general term for a group of metabolic diseases that are genetic in nature. In each specific porphyria the activity of specific enzymes in the heme biosynthetic pathway is defective and leads to accumulation of pathway intermediates. Phenotypically, each disease leads to either neurologic and/or photocutaneous symptoms based on the metabolic intermediate that accumulates. In each porphyria the distinct patterns of these substances in plasma, erythrocytes, urine and feces are the basis for diagnostically defining the metabolic defect underlying the clinical observations. Porphyrias may also be classified as either erythropoietic or hepatic, depending on the principal site of accumulation of pathway intermediates. The erythropoietic porphyrias are congenital erythropoietic porphyria (CEP), and erythropoietic protoporphyria (EPP). The acute hepatic porphyrias include ALA dehydratase deficiency porphyria, acute intermittent porphyria (AIP), hereditary coproporphyria (HCP) and variegate porphyria (VP). Porphyria cutanea tarda (PCT) is the only porphyria that has both genetic and/or environmental factors that lead to reduced activity of uroporphyrinogen decarboxylase in the liver. Each of the 8 enzymes in the heme biosynthetic pathway have been associated with a specific porphyria (Table 1). Mutations affecting the erythroid form of ALA synthase (ALAS2) are most commonly associated with X-linked sideroblastic anemia, however, gain-of-function mutations of ALAS2 have also been associated with a variant form of EPP. This overview does not describe the full clinical spectrum of the porphyrias, but is meant to be an overview of the biochemical steps that are required to make heme in both erythroid and non-erythroid cells.


Assuntos
Heme/biossíntese , Porfirias/genética , Animais , Vias Biossintéticas , Meio Ambiente , Humanos , Fígado/fisiopatologia , Camundongos , Mutação , Sintase do Porfobilinogênio/deficiência , Porfiria Aguda Intermitente , Porfirias/classificação , Porfirias/congênito , Porfirias Hepáticas , Uroporfirinogênio Descarboxilase/metabolismo
8.
Mol Genet Metab ; 128(3): 271-281, 2019 11.
Artigo em Inglês | MEDLINE | ID: mdl-30683557

RESUMO

Porphyria cutanea tarda (PCT) is the most common human porphyria, due to hepatic deficiency of uroporphyrinogen decarboxylase (UROD), which is acquired in the presence of iron overload and various susceptibility factors, such as alcohol abuse, smoking, hepatitis C virus (HCV) infection, HIV infection, iron overload with HFE gene mutations, use of estrogens, and UROD mutation. Patients with familial or type II PCT due to autosomal dominant UROD mutation also require other susceptibility factors, as the disease phenotype requires hepatic UROD deficiency to below 20% of normal. PCT clinically manifests with increased skin fragility and blistering skin lesions on sun exposed areas. The common age of presentation is 5th to 6th decade and occurs slightly more commonly in males. Although mild liver biochemical profile are common, advanced fibrosis and cirrhosis with hepatocellular carcinoma (HCC) can occasionally develop. Screening for HCC using ultrasound examination is recommended in PCT patients, especially with cirrhosis and advanced fibrosis. PCT is effectively and readily treatable with the use of either repeated phlebotomy or use of 100 mg hydroxychloroquine orally twice a week, and both the treatments are equally effective and safe. With the advent of new or direct antiviral agents for HCV infection, treatment of concomitant HCV has become safer and effective. Data are emerging on the benefit of these drugs as monotherapy for both PCT and HCV. After the achievement of remission of PCT, there remains a potential for relapse, especially when the susceptibility factors are not adequately controlled. Scanty data from retrospective and observational studies shows the relapse rate to be somewhat higher after remission with low-dose hydroxychloroquine as compared to phlebotomy induced remission. Future studies are needed on exploring mechanism of action of 4-aminoquinolines, understanding interaction of HCV and PCT, and relapse of PCT on long-term follow-up.


Assuntos
Mutação , Porfiria Cutânea Tardia/complicações , Porfiria Cutânea Tardia/genética , Aminoquinolinas/uso terapêutico , Animais , Carcinoma Hepatocelular/etiologia , Predisposição Genética para Doença , Humanos , Fígado/patologia , Neoplasias Hepáticas/etiologia , Camundongos , Recidiva Local de Neoplasia/etiologia , Estudos Observacionais como Assunto , Flebotomia , Porfiria Cutânea Tardia/tratamento farmacológico , Recidiva , Fatores de Risco , Uroporfirinogênio Descarboxilase/metabolismo
9.
J Med Case Rep ; 13(1): 17, 2019 Jan 21.
Artigo em Inglês | MEDLINE | ID: mdl-30661508

RESUMO

BACKGROUND: The porphyrias are a rare group of metabolic disorders that can either be inherited or acquired. Along the heme biosynthetic pathway, porphyrias can manifest with neurovisceral and/or cutaneous symptoms, depending on the defective enzyme. Porphyria cutanea tarda, the most common type of porphyria worldwide, is caused by a deficiency of uroporphyrinogen decarboxylase, a crucial enzyme in heme biosynthesis, which results in an accumulation of photosensitive byproducts, such as uroporphyrinogen, which leads to the fragility and blistering of sun-exposed skin. Porphyria cutanea tarda is a condition that affects the liver and skin by reduction and inhibition of uroporphyrinogen decarboxylase enzyme in erythrocytes. Areas of skin that are exposed to the sun can generate blisters, hyperpigmentation, and, sometimes, lesions that heal leaving a scar or keratosis. Liver damage might present in a wide range of ways from liver function test abnormalities to hepatocellular carcinoma. The toxic effect of iron plays a role in liver damage pathogenesis. CASE PRESENTATION: A 59-year-old Turkish man presented with hyperpigmented skin lesions, fatigue, and elevated ferritin level and liver function tests. He was diagnosed as having porphyria cutanea tarda after a clinical investigation and treated with phlebotomy. CONCLUSION: Porphyria cutanea tarda is a rare condition of the liver but it must be remembered in a differential diagnosis of liver disease with typical skin involvement to decrease morbidity and health costs with early treatment.


Assuntos
Hiperpigmentação/patologia , Flebotomia/métodos , Porfiria Cutânea Tardia/diagnóstico , Uroporfirinogênio Descarboxilase/metabolismo , Fadiga/etiologia , Humanos , Hiperpigmentação/etiologia , Masculino , Pessoa de Meia-Idade , Porfiria Cutânea Tardia/terapia , Resultado do Tratamento
10.
Mol Genet Metab ; 128(3): 363-366, 2019 11.
Artigo em Inglês | MEDLINE | ID: mdl-30514647

RESUMO

Porphyria Cutanea Tarda (PCT) is a cutaneous porphyria that results from the hepatic inhibition of the heme biosynthetic enzyme uroporphyrinogen decarboxylase (UROD), and can occur either in the absence or presence of an inherited heterozygous UROD mutation (PCT subtypes 1 and 2, respectively). A heterozygous UROD mutation causes half-normal levels of UROD activity systemically, which is a susceptibility factor but is not sufficient alone to cause type 2 PCT. In both Types 1 and 2 PCT, the cutaneous manifestations are precipitated by additional factors that lead to generation of an inhibitor that more profoundly reduces hepatic UROD activity. PCT is an iron-related disorder, and many of its known susceptibility factors, which include infections (e.g. hepatitis C virus, HIV), high alcohol consumption, smoking, estrogens, and genetic traits (e.g. hemochromatosis mutations) can increase hepatic iron accumulation. Hepatoerythropoietic Porphyria (HEP) is a rare autosomal recessive disease that results from homozygosity or compound heterozygosity for UROD mutations and often causes infantile or childhood onset of both erythropoietic and cutaneous manifestations. During the 11-year period from 01/01/2007 through 12/31/2017, the Mount Sinai Porphyrias Diagnostic Laboratory provided molecular diagnostic testing for 387 unrelated patients with PCT and four unrelated patients with HEP. Of the 387 unrelated individuals tested for Type 2 PCT, 79 (20%) were heterozygous for UROD mutations. Among 26 family members of mutation-positive PCT patients, eight (31%) had the respective family mutation. Additionally, of the four unrelated HEP patients referred for UROD mutation analyses, all had homozygosity or compound heterozygosity for UROD mutations, and all eight asymptomatic family members were heterozygotes for UROD mutations. Of the UROD mutations identified, 19 were novel, including nine missense, two nonsense, one consensus splice-site, and seven insertions and deletions. These results expand the molecular heterogeneity of PCT and HEP by adding a total of 19 novel UROD mutations. Moreover, the results document the usefulness of molecular testing to confirm a genetic susceptibility trait in Type 2 PCT, confirm a diagnosis in HEP, and identify heterozygous family members.


Assuntos
Heterogeneidade Genética , Mutação , Porfiria Cutânea Tardia/genética , Porfiria Hepatoeritropoética/genética , Uroporfirinogênio Descarboxilase/genética , Criança , Família , Triagem de Portadores Genéticos , Predisposição Genética para Doença , Heme/biossíntese , Humanos , Masculino , Técnicas de Diagnóstico Molecular
13.
Microbiol Mol Biol Rev ; 81(1)2017 03.
Artigo em Inglês | MEDLINE | ID: mdl-28123057

RESUMO

The advent of heme during evolution allowed organisms possessing this compound to safely and efficiently carry out a variety of chemical reactions that otherwise were difficult or impossible. While it was long assumed that a single heme biosynthetic pathway existed in nature, over the past decade, it has become clear that there are three distinct pathways among prokaryotes, although all three pathways utilize a common initial core of three enzymes to produce the intermediate uroporphyrinogen III. The most ancient pathway and the only one found in the Archaea converts siroheme to protoheme via an oxygen-independent four-enzyme-step process. Bacteria utilize the initial core pathway but then add one additional common step to produce coproporphyrinogen III. Following this step, Gram-positive organisms oxidize coproporphyrinogen III to coproporphyrin III, insert iron to make coproheme, and finally decarboxylate coproheme to protoheme, whereas Gram-negative bacteria first decarboxylate coproporphyrinogen III to protoporphyrinogen IX and then oxidize this to protoporphyrin IX prior to metal insertion to make protoheme. In order to adapt to oxygen-deficient conditions, two steps in the bacterial pathways have multiple forms to accommodate oxidative reactions in an anaerobic environment. The regulation of these pathways reflects the diversity of bacterial metabolism. This diversity, along with the late recognition that three pathways exist, has significantly slowed advances in this field such that no single organism's heme synthesis pathway regulation is currently completely characterized.


Assuntos
Archaea/metabolismo , Bactérias/metabolismo , Heme/análogos & derivados , Ferro/química , Tetrapirróis/biossíntese , Ácido Aminolevulínico/metabolismo , Coproporfirinogênio Oxidase/metabolismo , Coproporfirinas/metabolismo , Heme/biossíntese , Protoporfirinas/biossíntese , Protoporfirinas/metabolismo , Uroporfirinogênio Descarboxilase/metabolismo
14.
An Bras Dermatol ; 91(4): 520-3, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27579753

RESUMO

This is a case report about Porphyria cutanea tarda (PCT) and its relationship with the infection caused by the human immunodeficiency virus (HIV). Cutaneous porphyria is an illness caused by enzymatic modification that results in partial deficiency of uroporphyrinogen decarboxylase (Urod), which may be hereditary or acquired. Several studies suggest that HIV infection associated with cofactors might trigger the development of porphyria cutanea tarda. In this case report, we present a patient infected with HIV, who after the introduction of antiretroviral therapy (ART) enjoyed clinical improvement of porphyria cutanea tarda symptoms.


Assuntos
Infecções por HIV/complicações , Porfiria Cutânea Tardia/patologia , Porfiria Cutânea Tardia/virologia , Terapia Antirretroviral de Alta Atividade , Infecções por HIV/tratamento farmacológico , Humanos , Masculino , Pessoa de Meia-Idade , Porfiria Cutânea Tardia/tratamento farmacológico , Fatores de Risco , Pele/patologia , Uroporfirinogênio Descarboxilase/urina
15.
Arch. argent. dermatol ; 66(5): 137-140, sept. oct. 2016. ilus, tab
Artigo em Espanhol | LILACS | ID: biblio-916303

RESUMO

La porfiria cutánea tarda (PCT) es una enfermedad metabólica, crónica, que se produce por fallas en el metabolismo del hemo, debidas a deficiencia en la actividad de la enzima URO decarboxilasa. Se produce con más frecuencia en el sexo masculino y en adultos de mediana edad. Se clasifica en adquiridas y familiares, estas últimas de menor frecuencia, de acuerdo al antecedente familiar y al sitio de actividad de la enzima UROD. Las manifestaciones clínicas características son fragilidad cutánea, hipertricosis, fotosensibilidad y ampollas en áreas fotoexpuestas. El tratamiento de la enfermedad consiste en discontinuar los factores desencadenantes, reducir la sobrecarga hepática de hierro a través de flebotomías o el uso de antipalúdicos para movilizar el exceso de porfirinas. Presentamos el caso de una paciente femenina, con antecedente materno de PCT, que presentó manifestaciones clínicas en la adolescencia, asociado a factores desencadenantes y con excelente respuesta al tratamiento con flebotomías (AU)


Porphyria cutanea tarda (PCT) is a chronic metabolic disease caused by failures in heme metabolism, due to deficiency in the activity of the enzyme URO decarboxylase. Men and middle-age adults are often more affected. According to family history and the site of enzyme activity, PCT is classified in acquired or familial. Clinical features are skin fragility, hypertrichosis, photosensitivity and blisters on sun-exposed areas. Treatment of this disease is based on discontinuing the triggers, reduce liver iron overload trough phlebotomies or the use of antimalarial agents to mobilize excess porphyrins. A case of a female patient with a maternal history of PCT who presented clinical manifestations in adolescence, associated with triggers factors and excellent response to treatment with phlebotomies is reported (AU)


Assuntos
Humanos , Feminino , Adulto , Porfiria Cutânea Tardia/diagnóstico , Porfiria Cutânea Tardia/genética , Uroporfirinogênio Descarboxilase/deficiência
16.
An. bras. dermatol ; 91(4): 520-523, July-Aug. 2016. graf
Artigo em Inglês | LILACS | ID: lil-792453

RESUMO

Abstract: This is a case report about Porphyria cutanea tarda (PCT) and its relationship with the infection caused by the human immunodeficiency virus (HIV). Cutaneous porphyria is an illness caused by enzymatic modification that results in partial deficiency of uroporphyrinogen decarboxylase (Urod), which may be hereditary or acquired. Several studies suggest that HIV infection associated with cofactors might trigger the development of porphyria cutanea tarda. In this case report, we present a patient infected with HIV, who after the introduction of antiretroviral therapy (ART) enjoyed clinical improvement of porphyria cutanea tarda symptoms.


Assuntos
Humanos , Masculino , Pessoa de Meia-Idade , Infecções por HIV/complicações , Porfiria Cutânea Tardia/patologia , Porfiria Cutânea Tardia/virologia , Pele/patologia , Uroporfirinogênio Descarboxilase/urina , Infecções por HIV/tratamento farmacológico , Fatores de Risco , Porfiria Cutânea Tardia/tratamento farmacológico , Terapia Antirretroviral de Alta Atividade
17.
Adv Protein Chem Struct Biol ; 100: 153-85, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26415844

RESUMO

In this chapter, we discuss the influence of an anisotropic protein environment on the reaction mechanisms of saccharopine reductase and uroporphyrinogen decarboxylase, respectively, via the use of a quantum mechanical and molecular mechanical (QM/MM) approach. In addition, we discuss the importance of selecting a suitable DFT functional to be used in a QM/MM study of a key intermediate in the mechanism of 8R-lipoxygenase, a nonheme iron enzyme. In the case of saccharopine reductase, while the enzyme utilizes a substrate-assisted catalytic pathway, it was found that only through treating the polarizing effect of the active site, via the use of an electronic embedding formalism, was agreement with experimental kinetic data obtained. Similarly, in the case of uroporphyrinogen decarboxylase, the effect of the protein environment on the catalytic mechanism was found to be such that the calculated rate-limiting barrier is in good agreement with related experimentally determined values for the first decarboxylation of the substrate. For 8R-lipoxygenase, it was found that the geometries and energies of the multicentered open-shell intermediate complexes formed during the mechanism are quite sensitive to the choice of the density functional theory method. Thus, while density functional theory has become the method of choice in QM/MM studies, care must be taken in the selection of a particular high-level method.


Assuntos
Araquidonato Lipoxigenases/química , Simulação de Dinâmica Molecular , Sacaropina Desidrogenases/química , Uroporfirinogênio Descarboxilase/química , Animais , Anisotropia , Antozoários/química , Antozoários/enzimologia , Domínio Catalítico , Humanos , Cinética , Teoria Quântica , Especificidade por Substrato , Termodinâmica
18.
Acta Biochim Pol ; 62(3): 509-15, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26317124

RESUMO

Heme biosynthesis pathway is conserved in yeast and humans and hem12 yeast mutants mimic porphyria cutanea tarda (PCT), a hereditary human disease caused by mutations in the UROD gene. Even though mutations in other genes also affect UROD activity and predispose to sporadic PCT, the regulation of UROD is unknown. Here, we used yeast as a model to study regulation of Hem12 by ubiquitination and involvement of Rsp5 ubiquitin ligase in this process. We found that Hem12 is monoubiquitinated in vivo by Rsp5. Hem12 contains three conserved lysine residues located on the protein surface that can potentially be ubiquitinated and lysine K8 is close to the 36-LPEY-39 (PY) motif which binds WW domains of the Rsp5 ligase. The hem12-K8A mutation results in a defect in cell growth on a glycerol medium at 38°C but it does not affect the level of Hem12. The hem12-L36A,P37A mutations which destroy the PY motif result in a more profound growth defect on both, glycerol and glucose-containing media. However, after several passages on the glucose medium, the hem12-L36A,P37A cells adapt to the growth medium owing to higher expression of hem12-L36A,P37A gene and higher stability of the mutant Hem12-L36A,P37A protein. The Hem12 protein is downregulated upon heat stress in a Rsp5-independent way. Thus, Rsp5-dependent Hem12 monoubiquitination is important for its functioning, but not required for its degradation. Since Rsp5 has homologs among the Nedd4 family of ubiquitin ligases in humans, a similar regulation by ubiquitination might be also important for functioning of the human UROD.


Assuntos
Complexos Endossomais de Distribuição Requeridos para Transporte/metabolismo , Regulação Fúngica da Expressão Gênica , Mutação , Proteínas de Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/metabolismo , Saccharomyces cerevisiae/genética , Complexos Ubiquitina-Proteína Ligase/metabolismo , Uroporfirinogênio Descarboxilase/metabolismo , Motivos de Aminoácidos , Sequência de Aminoácidos , Regulação para Baixo , Glucose/química , Glicerol/química , Heme/metabolismo , Humanos , Lisina/química , Conformação Molecular , Dados de Sequência Molecular , Porfiria Cutânea Tardia/genética , Proteínas de Saccharomyces cerevisiae/fisiologia , Homologia de Sequência de Aminoácidos , Ubiquitina/química , Ubiquitinação , Uroporfirinogênio Descarboxilase/genética , Uroporfirinogênio Descarboxilase/fisiologia
19.
Environ Sci Pollut Res Int ; 22(8): 5877-86, 2015 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-25352395

RESUMO

Bisphenol A (BPA), as an emerging environmental pollutant, is potentially harmful to plant growth. Chlorophyll (Chl) is critical in photosynthesis that provides matter and energy for plant growth. How BPA affects the chlorophyll content remains largely unknown. Here, the effects of BPA on Chl synthesis in soybean seedlings were investigated. Exposure to 1.5 mg/L BPA decreased the 5-aminolevulinic acid (ALA) content and increased protoporphyrin IX (Proto IX), magnesium protoporphyrin, and protochlorophyll contents and 5-aminolaevulinic acid dehydratase, porphobilinogen deaminase, uroporphyrinogen III synthase, uroporphyrinogen III decarboxylase, and protoporphyrinogen oxidase activities. Exposure to 17.2 and 50.0 mg/L BPA exerted the opposite effects on these four intermediates and five enzymes. Following the withdrawal of BPA exposure, the aforementioned parameters gradually recovered, except magnesium protoporphyrin content in exposure to 50.0 mg/L BPA. Our findings revealed that exposure to low-concentration BPA increased the Chl content in soybean seedlings through improving Chl synthesis, especially the conversion from ALA to Proto IX, whereas exposure to high-concentration BPA decreased the Chl content through inhibiting Chl synthesis, especially the conversion from ALA to Proto IX. The dual effects of BPA were largely reversed following the withdrawal of BPA exposure.


Assuntos
Compostos Benzidrílicos/toxicidade , Vias Biossintéticas/efeitos dos fármacos , Poluentes Ambientais/toxicidade , Glycine max/efeitos dos fármacos , Fenóis/toxicidade , Fotossíntese/efeitos dos fármacos , Plântula/efeitos dos fármacos , Ácido Aminolevulínico/metabolismo , Análise de Variância , Clorofila/análogos & derivados , Clorofila/metabolismo , Hidroximetilbilano Sintase/metabolismo , Folhas de Planta/química , Sintase do Porfobilinogênio/metabolismo , Protoporfirinogênio Oxidase/metabolismo , Protoporfirinas/metabolismo , Plântula/metabolismo , Glycine max/metabolismo , Espectrometria de Fluorescência , Uroporfirinogênio Descarboxilase/metabolismo , Uroporfirinogênio III Sintetase/metabolismo
20.
Folia Biol (Praha) ; 61(6): 219-26, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26789143

RESUMO

Porphyrias are metabolic disorders resulting from mutations in haem biosynthetic pathway genes. Hepatoerythropoietic porphyria (HEP) is a rare type of porphyria caused by the deficiency of the fifth enzyme (uroporphyrinogen decarboxylase, UROD) in this pathway. The defect in the enzymatic activity is due to biallelic mutations in the UROD gene. Currently, 109 UROD mutations are known. The human disease has an early onset, manifesting in infancy or early childhood with red urine, skin photosensitivity in sun-exposed areas, and hypertrichosis. Similar defects and links to photosensitivity and hepatopathy exist in several animal models, including zebrafish and mice. In the present study, we report a new mutation in the UROD gene in Egyptian patients with HEP. We show that the homozygous c.T163A missense mutation leads to a substitution of a conserved phenylalanine (amino acid 55) for isoleucine in the enzyme active site, causing a dramatic decrease in the enzyme activity (19 % of activity of wild-type enzyme). Inspection of the UROD crystal structure shows that Phe-55 contacts the substrate and is located in the loop that connects helices 2 and 3. Phe-55 is strictly conserved in both prokaryotic and eukaryotic UROD. The F55I substitution likely interferes with the enzyme-substrate interaction.


Assuntos
Alelos , Predisposição Genética para Doença , Mutação/genética , Porfiria Hepatoeritropoética/enzimologia , Porfiria Hepatoeritropoética/genética , Uroporfirinogênio Descarboxilase/genética , Adolescente , Sequência de Aminoácidos , Sequência de Bases , Criança , Cicatriz/complicações , Análise Mutacional de DNA , Egito , Família , Feminino , Humanos , Hipertricose/complicações , Masculino , Modelos Moleculares , Dados de Sequência Molecular , Taxa de Mutação , Linhagem , Porfiria Hepatoeritropoética/complicações , Proteínas Recombinantes de Fusão/metabolismo , Alinhamento de Sequência , Uroporfirinogênio Descarboxilase/química
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